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blood culture identification panel [bcid] on the biofire filmarray instrument  (BioFire Defense)

 
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    BioFire Defense blood culture identification panel [bcid] on the biofire filmarray instrument
    Direct metagenomic sequencing from positive blood culture broths compared with culture-based methods and commercial rapid diagnostics. Two DNA extraction methods were compared each using half (n=20) of the samples. AxDx = Accelerate <t>Pheno;</t> <t>BCID</t> = blood culture identification PCR panel (bioMérieux); gDNA = genomic DNA; SPRI = solid-phase reversible immobilization; PCR = polymerase chain reaction; ID = identification; AST = antimicrobial susceptibility testing; WGS = whole genome sequencing; MALDI-TOF = matrix-assisted laser desorption/ionization-time of flight; <t>AMR</t> = antimicrobial resistance; ML = machine learning
    Blood Culture Identification Panel [Bcid] On The Biofire Filmarray Instrument, supplied by BioFire Defense, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/blood culture identification panel [bcid] on the biofire filmarray instrument/product/BioFire Defense
    Average 90 stars, based on 1 article reviews
    blood culture identification panel [bcid] on the biofire filmarray instrument - by Bioz Stars, 2026-04
    90/100 stars

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    1) Product Images from "An optimised method for bacterial nucleic acid extraction from positive blood culture broths for whole genome sequencing, resistance phenotype prediction and downstream molecular applications"

    Article Title: An optimised method for bacterial nucleic acid extraction from positive blood culture broths for whole genome sequencing, resistance phenotype prediction and downstream molecular applications

    Journal: bioRxiv

    doi: 10.1101/2022.06.30.497578

    Direct metagenomic sequencing from positive blood culture broths compared with culture-based methods and commercial rapid diagnostics. Two DNA extraction methods were compared each using half (n=20) of the samples. AxDx = Accelerate Pheno; BCID = blood culture identification PCR panel (bioMérieux); gDNA = genomic DNA; SPRI = solid-phase reversible immobilization; PCR = polymerase chain reaction; ID = identification; AST = antimicrobial susceptibility testing; WGS = whole genome sequencing; MALDI-TOF = matrix-assisted laser desorption/ionization-time of flight; AMR = antimicrobial resistance; ML = machine learning
    Figure Legend Snippet: Direct metagenomic sequencing from positive blood culture broths compared with culture-based methods and commercial rapid diagnostics. Two DNA extraction methods were compared each using half (n=20) of the samples. AxDx = Accelerate Pheno; BCID = blood culture identification PCR panel (bioMérieux); gDNA = genomic DNA; SPRI = solid-phase reversible immobilization; PCR = polymerase chain reaction; ID = identification; AST = antimicrobial susceptibility testing; WGS = whole genome sequencing; MALDI-TOF = matrix-assisted laser desorption/ionization-time of flight; AMR = antimicrobial resistance; ML = machine learning

    Techniques Used: Sequencing, DNA Extraction, Polymerase Chain Reaction



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    blood culture identification panel [bcid] on the biofire filmarray instrument  (BioFire Defense)
    90
    BioFire Defense blood culture identification panel [bcid] on the biofire filmarray instrument
    Direct metagenomic sequencing from positive blood culture broths compared with culture-based methods and commercial rapid diagnostics. Two DNA extraction methods were compared each using half (n=20) of the samples. AxDx = Accelerate <t>Pheno;</t> <t>BCID</t> = blood culture identification PCR panel (bioMérieux); gDNA = genomic DNA; SPRI = solid-phase reversible immobilization; PCR = polymerase chain reaction; ID = identification; AST = antimicrobial susceptibility testing; WGS = whole genome sequencing; MALDI-TOF = matrix-assisted laser desorption/ionization-time of flight; <t>AMR</t> = antimicrobial resistance; ML = machine learning
    Blood Culture Identification Panel [Bcid] On The Biofire Filmarray Instrument, supplied by BioFire Defense, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/blood culture identification panel [bcid] on the biofire filmarray instrument/product/BioFire Defense
    Average 90 stars, based on 1 article reviews
    blood culture identification panel [bcid] on the biofire filmarray instrument - by Bioz Stars, 2026-04
    90/100 stars
    		  Buy from Supplier

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    Direct metagenomic sequencing from positive blood culture broths compared with culture-based methods and commercial rapid diagnostics. Two DNA extraction methods were compared each using half (n=20) of the samples. AxDx = Accelerate Pheno; BCID = blood culture identification PCR panel (bioMérieux); gDNA = genomic DNA; SPRI = solid-phase reversible immobilization; PCR = polymerase chain reaction; ID = identification; AST = antimicrobial susceptibility testing; WGS = whole genome sequencing; MALDI-TOF = matrix-assisted laser desorption/ionization-time of flight; AMR = antimicrobial resistance; ML = machine learning

    Journal: bioRxiv

    Article Title: An optimised method for bacterial nucleic acid extraction from positive blood culture broths for whole genome sequencing, resistance phenotype prediction and downstream molecular applications

    doi: 10.1101/2022.06.30.497578

    Figure Lengend Snippet: Direct metagenomic sequencing from positive blood culture broths compared with culture-based methods and commercial rapid diagnostics. Two DNA extraction methods were compared each using half (n=20) of the samples. AxDx = Accelerate Pheno; BCID = blood culture identification PCR panel (bioMérieux); gDNA = genomic DNA; SPRI = solid-phase reversible immobilization; PCR = polymerase chain reaction; ID = identification; AST = antimicrobial susceptibility testing; WGS = whole genome sequencing; MALDI-TOF = matrix-assisted laser desorption/ionization-time of flight; AMR = antimicrobial resistance; ML = machine learning

    Article Snippet: For comparison, positive blood culture broths were also tested using two commercially available platforms that provide rapid species identification and limited AMR gene profiling (Blood Culture Identification Panel [BCID] on the BioFire FilmArray Instrument; bioMérieux) as well as predictive MIC using morphokinetic cellular analysis (Accelerate Pheno; Accelerate Diagnostics).

    Techniques: Sequencing, DNA Extraction, Polymerase Chain Reaction